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Monosomy 1p36 syndrome

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A 2-year-old has severe intellectual disability, microcephaly with pointed chin, deep-set eyes, and straight eyebrows. She has hypotonia, refractory seizures, and a structural heart defect (non-compaction cardiomyopathy was found on echo). CMA reports a 4 Mb terminal deletion of 1p36.

Terminal deletion of the short arm of chromosome 1 (1p36). The most common terminal deletion syndrome (~1 in 5,000 births). Most are de novo; ~20% from unbalanced translocations of a parent. Deletion size and breakpoints vary, which contributes to phenotypic variability.

  • Severe intellectual disability with limited speech
  • Hypotonia and feeding difficulties in infancy
  • Microcephaly with characteristic facies: straight eyebrows, deep-set eyes, midface retrusion, pointed chin, low-set/posteriorly rotated ears
  • Seizures (~50%, often refractory) and cortical visual impairment
  • Cardiomyopathy: left ventricular non-compaction (LVNC) is over-represented and a major cause of mortality
  • Structural CHD (~70%): PDA, ASD, VSD, valve anomalies
  • Behavior: self-injury, autistic features common
  • Hearing loss; ophthalmologic findings (strabismus, refractive errors)
  • Chromosomal microarray (CMA) is the test of choice: detects the deletion and characterizes its size
  • Karyotype may miss small deletions; FISH for 1p36 confirms when CMA isn't available
  • Parental karyotype/FISH if a translocation is suggested by clinical context (recurrence implications)
  • Other terminal deletion syndromes (Wolf-Hirschhorn 4p-, Cri-du-chat 5p-): different facies, different phenotype
  • Angelman syndrome: seizures + ID + hypotonia, but happy demeanor and characteristic EEG; methylation analysis
  • Rett syndrome: regression, hand stereotypies, female predominance; MECP2
  • Cardiology: baseline echo + serial echocardiography (LVNC surveillance is life-saving)
  • Neurology: seizure management
  • Developmental: early intervention, augmentative communication
  • GI: feeding evaluation, possible G-tube
  • Family genetic counseling: most de novo, low recurrence; if parental translocation, ~25-50% recurrence

1p36 deletion face mnemonic: straight (horizontal) eyebrows, deep-set eyes with cortical visual impairment, cleft lip/palate and feeding difficulty, and cardiac involvement (LVNC, structural CHD)
1p36 deletion face mnemonic: straight (horizontal) eyebrows, deep-set eyes with cortical visual impairment, cleft lip/palate and feeding difficulty, and cardiac involvement (LVNC, structural CHD)